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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1305.9TPM
GTEx:258.6RPKM
FANTOM5:321.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA018531

  

Adipocytes

 Low  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA018531

  

Adipocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

1305.9
N/A Female, age 80 Sample 1
TPM: 2056.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 504.5
N/A Female, age 57 Sample 3
TPM: 485.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 2596.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 885.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

258.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 114.1
Samples: 350

Max RPKM: 2663.8
Min RPKM: 8.2
Std RPKM: 201.0
Median RPKM: 59.8
GTEX-YECK-0226-SM-4W215 60-69 years, male 2663.8
GTEX-1128S-2126-SM-5H12U 60-69 years, female 1354.7
GTEX-TMZS-0226-SM-3DB9N 60-69 years, male 1013.9
GTEX-13JVG-0226-SM-5J1MW 60-69 years, male 936.6
GTEX-X88G-0226-SM-4GIE4 30-39 years, male 726.3
GTEX-RU72-1026-SM-46MUG 50-59 years, female 722.5
GTEX-ZV68-0226-SM-59HJF 50-59 years, female 684.6
GTEX-1399R-2626-SM-5KLZ7 30-39 years, male 669.6
GTEX-113IC-0226-SM-5HL5C 60-69 years, male 652.6
GTEX-SIU8-0226-SM-2XCDS 50-59 years, male 637.5
Show all
Adipose - Visceral (Omentum)
RPKM: 481.5
Samples: 227

Max RPKM: 2140.2
Min RPKM: 13.2
Std RPKM: 434.8
Median RPKM: 344.4
GTEX-X3Y1-0926-SM-3P5YT 40-49 years, male 2140.2
GTEX-131XE-2026-SM-5LZW1 50-59 years, male 1870.3
GTEX-ZGAY-1326-SM-5S2NS 40-49 years, female 1824.8
GTEX-13D11-0526-SM-5LZYM 50-59 years, female 1824.0
GTEX-145ME-0726-SM-5O9A3 40-49 years, female 1763.7
GTEX-XGQ4-1026-SM-4AT4L 50-59 years, male 1754.7
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 1628.5
GTEX-ZEX8-1226-SM-5S2OK 50-59 years, male 1620.6
GTEX-XQ8I-1426-SM-4BOPW 50-59 years, male 1620.5
GTEX-ZTPG-2326-SM-57WFL 20-29 years, female 1563.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

321.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 321.8
FF:10010-101C1 65,65,76 years, mixed 321.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.