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Field

Term
Gene name

Class

Subclass

Chromosome

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In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

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Score

Score

Antibodies

Column

 
 
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TMED10
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    TISSUE

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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

TMED10

Gene description

Transmembrane p24 trafficking protein 10

Protein class

Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous cytoplasmic expression.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Supported based on 4 antibodies.
HPA047139 , HPA050539 , CAB034442 , CAB037251
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

TMED10 (HGNC Symbol)

Synonyms

p23, P24(DELTA), p24d1, p24delta1, TMP21

Description

Transmembrane p24 trafficking protein 10 (HGNC Symbol)

Entrez gene summary

This gene is a member of the EMP24/GP25L/p24 family and encodes a protein with a GOLD domain. This type I membrane protein is localized to the plasma membrane and golgi cisternae and is involved in vesicular protein trafficking. The protein is also a member of a heteromeric secretase complex and regulates the complex's gamma-secretase activity without affecting its epsilon-secretase activity. Mutations in this gene have been associated with early-onset familial Alzheimer's disease. This gene has a pseudogene on chromosome 8. [provided by RefSeq, Jul 2008]

Chromosome

14

Cytoband

q24.3

Chromosome location (bp)

75131470 - 75176631

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000170348 (version 83.38)

Entrez gene

10972

UniProt

P49755 (UniProt - Evidence at protein level)

neXtProt

NX_P49755

Antibodypedia

TMED10 antibodies

PROTEIN BROWSER

TMED10-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TMED10-001
ENSP00000303145
ENST00000303575
P49755 [Direct mapping]
Transmembrane emp24 domain-containing protein 10
A0A024R6I3 [Target identity:100%; Query identity:100%]
Transmembrane emp24-like trafficking protein 10 (Yeast), isoform CRA_a
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0001822 [kidney development]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005793 [endoplasmic reticulum-Golgi intermediate compartment]
GO:0005794 [Golgi apparatus]
GO:0005801 [cis-Golgi network]
GO:0005886 [plasma membrane]
GO:0006810 [transport]
GO:0006886 [intracellular protein transport]
GO:0006888 [ER to Golgi vesicle-mediated transport]
GO:0006890 [retrograde vesicle-mediated transport, Golgi to ER]
GO:0007030 [Golgi organization]
GO:0012507 [ER to Golgi transport vesicle membrane]
GO:0016021 [integral component of membrane]
GO:0018279 [protein N-linked glycosylation via asparagine]
GO:0019905 [syntaxin binding]
GO:0030137 [COPI-coated vesicle]
GO:0030140 [trans-Golgi network transport vesicle]
GO:0030667 [secretory granule membrane]
GO:0032403 [protein complex binding]
GO:0033116 [endoplasmic reticulum-Golgi intermediate compartment membrane]
GO:0035459 [cargo loading into vesicle]
GO:0035964 [COPI-coated vesicle budding]
GO:0042470 [melanosome]
GO:0042589 [zymogen granule membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0043279 [response to alkaloid]
GO:0043687 [post-translational protein modification]
GO:0044267 [cellular protein metabolic process]
GO:0045055 [regulated secretory pathway]
GO:0048199 [vesicle targeting, to, from or within Golgi]
GO:0048205 [COPI coating of Golgi vesicle]
GO:0048208 [COPII vesicle coating]
GO:0051259 [protein oligomerization]
GO:0061024 [membrane organization]
GO:0070062 [extracellular exosome]
GO:0070765 [gamma-secretase complex]
GO:1902003 [regulation of beta-amyloid formation]
Show all
219 aa
25 kDa
Yes 1

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