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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:83.4TPM
GTEx:55.5RPKM
FANTOM5:46.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Not detected
 

Antibody staining

Antibody HPA046966

  

Squamous epithelial cells

 Not detected  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

83.4
overview Female, age 70 Sample 1
TPM: 83.9
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 65.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 100.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

55.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 55.5
Samples: 286

Max RPKM: 156.5
Min RPKM: 6.6
Std RPKM: 22.4
Median RPKM: 55.8
GTEX-X4XY-1726-SM-46MVO 60-69 years, male 156.5
GTEX-P4PQ-0626-SM-3NMCU 60-69 years, male 117.2
GTEX-OXRP-0926-SM-48TC1 60-69 years, female 116.2
GTEX-OXRN-1726-SM-3NM9B 50-59 years, male 113.9
GTEX-ZT9W-1326-SM-51MTB 50-59 years, male 110.5
GTEX-ZTPG-1626-SM-5DUX2 20-29 years, female 108.9
GTEX-13QJ3-1726-SM-5RQK9 50-59 years, male 106.9
GTEX-O5YV-1026-SM-3LK72 60-69 years, female 103.3
GTEX-Y5LM-1026-SM-4VDSQ 40-49 years, female 102.7
GTEX-ZUA1-1226-SM-5NQ6O 40-49 years, male 101.3
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

46.9

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 46.9
FF:10015-101C6 68,74,75 years, mixed 46.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.