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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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MCC
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

MCC

Gene description

Mutated in colorectal cancers

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Tissue enhanced (ovary, parathyroid gland)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA037390 , HPA037391
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA037390
HPA037391

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Few cases of seminomas, gliomas and melanomas displayed moderate to strong cytoplasmic immunoreactivity. Remaining cancer tissues were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A majority of cancer tissues displayed weak to moderate cytoplasmic staining. Occasional cases of seminomas, gliomas and duct carcinomas of breast were strongly stained. Several cases of squamous cell carcinomas, hepatocellular carcinomas and gastric cancers were negative.

GENE INFORMATION

Gene name

MCC

Synonyms

Description

Mutated in colorectal cancers (HGNC Symbol)

Entrez gene summary

This gene is a candidate colorectal tumor suppressor gene that is thought to negatively regulate cell cycle progression. The orthologous gene in the mouse expresses a phosphoprotein associated with the plasma membrane and membrane organelles, and overexpression of the mouse protein inhibits entry into S phase. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Chromosome

5

Cytoband

q22.2

Chromosome location (bp)

113022099 - 113488830

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000171444 (version 83.38)

Entrez gene

4163

UniProt

P23508 (UniProt - Evidence at protein level)

neXtProt

NX_P23508

Antibodypedia

MCC antibodies

PROTEIN BROWSER

MCC-001
MCC-003
MCC-009
MCC-011
MCC-012

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

MCC-001
ENSP00000305617
ENST00000302475
P23508 [Direct mapping]
Colorectal mutant cancer protein
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004872 [receptor activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0016055 [Wnt signaling pathway]
GO:0030027 [lamellipodium]
GO:0045184 [establishment of protein localization]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
Show all
829 aa
93 kDa
No 0
MCC-003
ENSP00000386227
ENST00000408903
P23508 [Direct mapping]
Colorectal mutant cancer protein
Show all
   Phobius predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004872 [receptor activity]
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0016055 [Wnt signaling pathway]
GO:0030027 [lamellipodium]
GO:0045184 [establishment of protein localization]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
Show all
1019 aa
113.3 kDa
No 0
MCC-009
ENSP00000485220
ENST00000514701
A0A096LNU0 [Direct mapping]
Colorectal mutant cancer protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
715 aa
79.9 kDa
No 0
MCC-011
ENSP00000421615
ENST00000515367
D6REY2 [Direct mapping]
Colorectal mutant cancer protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
Show all
766 aa
86.1 kDa
No 0
MCC-012
ENSP00000485492
ENST00000624689
A0A096LPB3 [Direct mapping]
Colorectal mutant cancer protein
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
169 aa
19.1 kDa
No 0

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