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TISSUE ATLAS SMALL INTESTINE

GENE/PROTEIN

Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

RNA expression

HPA:10.1TPM
GTEx:9.6RPKM
FANTOM5:21.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis


SMALL INTESTINE - HPA RNA-seq

Average TPM

10.1

overview Male, age 65 Sample 1
TPM: 7.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 8.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 12.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 11.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

9.6

GTEx sample id

Sample description

RPKM

7.49.111.24.016.6024681012141618
7.49.111.24.016.6024681012141618
Small Intestine - Terminal Ileum
RPKM: 9.6
Samples: 88

Max RPKM: 18.5
Min RPKM: 4.0
Std RPKM: 2.7
Median RPKM: 9.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 18.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 16.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 16.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 15.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 15.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 14.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 14.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 13.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 12.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 12.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 12.5
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 12.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 12.0
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 12.0
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 11.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 11.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 11.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 11.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 11.4
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 11.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 11.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 11.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 11.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 11.2
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 11.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 11.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 10.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 10.9
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 10.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 10.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 10.7
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 10.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 10.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 10.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 10.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 10.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 10.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 9.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 9.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 9.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 9.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 9.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 9.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 9.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 8.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 8.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 8.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 8.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 8.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 8.7
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 8.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 8.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 8.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 8.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 8.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 8.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 8.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 8.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 7.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 7.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 7.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 7.9
GTEX-ZTSS-0926-SM-59865 40-49 years, male 7.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 7.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 7.4
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 7.4
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 7.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 7.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 7.2
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 7.1
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 7.0
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 7.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 6.8
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 6.8
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 6.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 6.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 6.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 6.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 6.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 6.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 6.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 6.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 6.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 6.1
GTEX-1192X-2526-SM-59868 50-59 years, male 5.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 5.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 5.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 4.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

21.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 21.2
FF:10024-101D6 15,40,85 years, mixed 21.2

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