Fields »
ABOUT
HELP
BLOG
LAMB2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.3TPM
GTEx:56.9RPKM
FANTOM5:194.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB000053

  

Antibody CAB078160

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

20.3
overview Male, age 54 Sample 1
TPM: 21.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 24.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 35.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 30.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 27.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 25.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

56.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 74.8
Samples: 149

Max RPKM: 115.8
Min RPKM: 42.0
Std RPKM: 15.8
Median RPKM: 74.4
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 115.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 115.5
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 114.9
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 111.0
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 103.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 103.8
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 102.4
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 102.3
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 99.9
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 99.9
Show all
Colon - Transverse
RPKM: 43.3
Samples: 196

Max RPKM: 96.7
Min RPKM: 7.6
Std RPKM: 24.6
Median RPKM: 36.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 96.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 95.5
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 93.5
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 93.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 91.1
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 90.8
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 89.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 87.4
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 86.9
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 85.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

194.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 194.2
FF:10014-101C5 62,83,84 years, mixed 194.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.