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TP53RK

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.4TPM
GTEx:4.1RPKM
FANTOM5:18.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA015837

  

Antibody CAB004688

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

6.4
overview Male, age 54 Sample 1
TPM: 9.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.2
Samples: 149

Max RPKM: 6.4
Min RPKM: 2.2
Std RPKM: 0.9
Median RPKM: 4.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 6.4
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 6.2
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 6.0
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 6.0
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 6.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 5.9
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 5.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 5.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 5.8
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 5.6
Show all
Colon - Transverse
RPKM: 4.0
Samples: 196

Max RPKM: 7.2
Min RPKM: 1.2
Std RPKM: 0.9
Median RPKM: 3.9
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 7.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 7.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 7.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 6.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 6.4
GTEX-QMRM-1226-SM-447C6 50-59 years, male 6.4
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 5.9
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 5.9
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 5.8
GTEX-Y114-1526-SM-4TT79 50-59 years, female 5.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

18.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 18.0
FF:10014-101C5 62,83,84 years, mixed 18.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.