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BPGM

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.6TPM
GTEx:5.4RPKM
FANTOM5:11.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not available
 

Antibody staining

Antibody HPA016493

  

Antibody HPA028735

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not available
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA016493

  

Antibody HPA028735

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Chondrocytes

 Low  

Peripheral nerve

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

12.6
N/A Female, age 80 Sample 1
TPM: 12.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 12.2
N/A Female, age 57 Sample 3
TPM: 12.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 14.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 11.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

5.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 5.7
Samples: 350

Max RPKM: 9.8
Min RPKM: 2.5
Std RPKM: 1.1
Median RPKM: 5.6
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 9.8
GTEX-13OW6-0526-SM-5L3HY 50-59 years, male 8.7
GTEX-147GR-0426-SM-5S2OL 60-69 years, male 8.7
GTEX-S33H-1126-SM-2XCB6 30-39 years, male 8.7
GTEX-S7SE-0226-SM-2XCD4 50-59 years, male 8.3
GTEX-SNOS-1426-SM-32PLY 40-49 years, male 8.3
GTEX-1399T-2726-SM-5K7XK 60-69 years, male 8.2
GTEX-ZZPU-2726-SM-5NQ8O 50-59 years, female 8.2
GTEX-12126-0426-SM-5Q5AP 20-29 years, male 8.1
GTEX-ZDYS-2126-SM-5S2OD 50-59 years, male 8.1
Show all
Adipose - Visceral (Omentum)
RPKM: 4.8
Samples: 227

Max RPKM: 9.6
Min RPKM: 2.0
Std RPKM: 1.3
Median RPKM: 4.7
GTEX-12ZZX-1726-SM-5BC63 40-49 years, female 9.6
GTEX-12WSI-1526-SM-5GCNM 50-59 years, male 9.1
GTEX-X585-2526-SM-4QAS1 50-59 years, male 8.0
GTEX-ZE7O-1526-SM-5J1NH 50-59 years, female 7.9
GTEX-11OF3-0826-SM-5BC51 60-69 years, male 7.8
GTEX-13OVL-0826-SM-5L3GV 50-59 years, male 7.8
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 7.7
GTEX-12584-2126-SM-5FQUM 40-49 years, male 7.7
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 7.6
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 7.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

11.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 11.9
FF:10010-101C1 65,65,76 years, mixed 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.