Fields »
ABOUT
HELP
BLOG
PEAK1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.4TPM
GTEx:9.0RPKM
FANTOM5:63.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
Chondrocytes:High
 

Antibody staining

Antibody HPA026313

  

Antibody HPA026517

  

Adipocytes

 High   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low   Medium  

Chondrocytes

 High  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA026313

  

Antibody HPA026517

  

Adipocytes

 Medium   Low  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Medium   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

13.4
N/A Female, age 80 Sample 1
TPM: 17.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 11.5
N/A Female, age 57 Sample 3
TPM: 10.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 10.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 17
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 10.4
Samples: 350

Max RPKM: 19.0
Min RPKM: 3.9
Std RPKM: 2.6
Median RPKM: 10.3
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 19.0
GTEX-SJXC-0226-SM-2XCDU 60-69 years, male 18.6
GTEX-ZEX8-2326-SM-5S2MN 50-59 years, male 17.6
GTEX-S7SE-0226-SM-2XCD4 50-59 years, male 17.3
GTEX-13S7M-0226-SM-5S2UG 60-69 years, female 16.9
GTEX-13PVQ-0226-SM-5SIBG 50-59 years, male 16.6
GTEX-11PRG-0626-SM-5BC56 50-59 years, male 16.3
GTEX-WVJS-0226-SM-4MVOU 50-59 years, male 16.1
GTEX-139TU-0226-SM-5J1NM 60-69 years, male 16.0
GTEX-ZYFC-0326-SM-5NQ7H 50-59 years, male 15.9
Show all
Adipose - Visceral (Omentum)
RPKM: 6.9
Samples: 227

Max RPKM: 14.1
Min RPKM: 1.3
Std RPKM: 2.3
Median RPKM: 6.8
GTEX-11GS4-1026-SM-5N9DE 60-69 years, male 14.1
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 13.6
GTEX-XUZC-1126-SM-4BOPZ 30-39 years, female 13.3
GTEX-ZXG5-1626-SM-59HJK 60-69 years, male 13.1
GTEX-117YW-0826-SM-5H11O 50-59 years, male 11.8
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 11.5
GTEX-ZDXO-2326-SM-5LU9W 60-69 years, male 11.0
GTEX-11OF3-0826-SM-5BC51 60-69 years, male 10.9
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 10.9
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 10.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

63.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 63.5
FF:10010-101C1 65,65,76 years, mixed 63.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.