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CHD2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.3TPM
GTEx:11.5RPKM
FANTOM5:92.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA060744

  

Antibody HPA060960

  

Endothelial cells

 Medium   Low  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

15.3
overview Male, age 54 Sample 1
TPM: 14.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 15.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.2
Samples: 149

Max RPKM: 31.0
Min RPKM: 6.2
Std RPKM: 3.1
Median RPKM: 11.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 31.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 23.8
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 22.5
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 22.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 21.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 17.3
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 16.9
GTEX-12696-1926-SM-5EGJT 60-69 years, male 16.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 16.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 16.1
Show all
Colon - Transverse
RPKM: 11.0
Samples: 196

Max RPKM: 29.5
Min RPKM: 5.8
Std RPKM: 2.7
Median RPKM: 10.8
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 29.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 21.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 21.1
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 19.8
GTEX-Y114-1526-SM-4TT79 50-59 years, female 16.8
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 16.7
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 16.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 15.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 15.6
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 15.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

92.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 92.7
FF:10014-101C5 62,83,84 years, mixed 92.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.