Tissue expression of CHD2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	15.2	TPM
GTEx:	10.0	RPKM
FANTOM5:	74.5	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA060744	Antibody HPA060960
Squamous epithelial cells	Low	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	15.2

Female, age 70

Sample 1
TPM: 9.9

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 16.7

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 18.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	10.0

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 10.0

Samples: 286

Max RPKM: 21.4
Min RPKM: 5.5
Std RPKM: 2.3
Median RPKM: 9.7

GTEX-13O1R-1326-SM-5IJF5

60-69 years, male

21.4

GTEX-13FLV-1126-SM-5J2NO

50-59 years, male

21.3

GTEX-145MF-1426-SM-5O9B6

50-59 years, male

19.5

GTEX-13O3Q-0826-SM-5IFGF

50-59 years, male

16.7

GTEX-XLM4-2326-SM-4TT2D

60-69 years, male

16.3

GTEX-13PVQ-1726-SM-5IFF3

50-59 years, male

16.0

GTEX-ZF3C-1626-SM-4WWB4

50-59 years, female

15.4

GTEX-ZYW4-1326-SM-5E45N

60-69 years, male

15.4

GTEX-ZAB4-1126-SM-5HL86

40-49 years, male

15.3

GTEX-132Q8-1826-SM-5EGIY

60-69 years, male

15.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	74.5

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 74.5

FF:10015-101C6

68,74,75 years, mixed

74.5