We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
TOMM20
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:58.0RPKM
FANTOM5:181.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA011562

 

Antibody CAB005585

 

Glial cells

Not detected   Medium  

Neuronal cells

High   High  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

58.0

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 58.0
Samples: 94

Max RPKM: 107.9
Min RPKM: 15.9
Std RPKM: 23.6
Median RPKM: 55.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 107.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 105.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 104.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 104.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 104.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 102.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 95.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 94.7
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 94.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 93.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 92.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 88.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 88.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 87.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 87.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 86.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 82.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 80.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 80.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 79.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 77.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 77.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 75.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 75.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 75.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 73.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 70.9
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 70.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 69.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 68.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 68.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 67.9
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 67.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 65.2
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 64.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 63.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 61.3
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 61.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 60.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 60.5
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 59.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 59.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 58.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 57.5
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 56.5
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 56.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 56.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 55.6
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 55.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 53.8
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 51.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 51.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 51.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 51.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 50.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 50.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 49.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 48.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.5
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 47.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 46.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 46.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 45.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 44.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 42.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 41.1
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 40.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 40.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 40.2
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 38.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 38.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 36.8
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 34.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 34.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 33.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 32.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 31.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 31.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 31.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 31.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 27.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 27.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 23.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 22.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 21.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 20.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 19.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 19.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 18.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 15.9
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

181.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 158.9
FF:10169-103B7 60 years, female 185.4
FF:10153-102I9 76 years, female 132.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.