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MSRB3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.3TPM
GTEx:6.3RPKM
FANTOM5:33.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA014432

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

29.3
overview Male, age 54 Sample 1
TPM: 21.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 107.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 69.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 24.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 44.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 21.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.0
Samples: 149

Max RPKM: 21.5
Min RPKM: 2.0
Std RPKM: 4.1
Median RPKM: 8.6
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 21.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 20.5
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 20.4
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 20.1
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 18.8
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 17.6
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 16.8
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 16.2
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 15.0
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 14.8
Show all
Colon - Transverse
RPKM: 4.3
Samples: 196

Max RPKM: 19.0
Min RPKM: 0.0
Std RPKM: 4.3
Median RPKM: 3.0
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 19.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 16.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 16.0
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 15.7
GTEX-117YX-0826-SM-5H11J 50-59 years, male 14.1
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 14.0
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 13.6
GTEX-XGQ4-1226-SM-4AT67 50-59 years, male 13.2
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 12.8
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 12.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

33.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 33.1
FF:10014-101C5 62,83,84 years, mixed 33.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.