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SLC6A19

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.0TPM
GTEx:2.4RPKM
FANTOM5:279.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA037415

  

Antibody HPA043207

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

4.0
overview Male, age 54 Sample 1
TPM: 5.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 10.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 14.5
Min RPKM: 0.0
Std RPKM: 1.1
Median RPKM: 0.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 14.5
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 1.1
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 0.5
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.5
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 0.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 0.4
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 0.4
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.3
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 0.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 0.3
Show all
Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 59.1
Min RPKM: 0.0
Std RPKM: 7.7
Median RPKM: 0.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 59.1
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 37.2
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 34.1
GTEX-R55G-1226-SM-48FDC 40-49 years, female 29.7
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 28.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 27.9
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 22.7
GTEX-OIZH-1426-SM-3NB1O 50-59 years, male 22.3
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 21.3
GTEX-R55C-1126-SM-48FCJ 40-49 years, male 18.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

279.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 279.3
FF:10014-101C5 62,83,84 years, mixed 279.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.