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ABRA

COLON - Expression summary

RNA expression
HPA:0.1TPM
GTEx:0.1RPKM
FANTOM5:0.5Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA017724

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.1
overview Male, age 54 Sample 1
TPM: 0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 4.0
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 4.0
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 3.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 1.1
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 0.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 0.4
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 0.4
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 0.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.4
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 0.4
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 0.3
Show all
Colon - Transverse
RPKM: 0.1
Samples: 196

Max RPKM: 2.2
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.0
GTEX-Y8E4-2426-SM-4WWDN 40-49 years, male 2.2
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 1.8
GTEX-QMRM-1226-SM-447C6 50-59 years, male 1.0
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 0.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 0.6
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 0.5
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 0.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 0.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 0.4
GTEX-139YR-2126-SM-5KM11 50-59 years, male 0.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.5
FF:10014-101C5 62,83,84 years, mixed 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.