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ARHGAP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:33.2TPM
GTEx:39.2RPKM
FANTOM5:96.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA004689

  

Antibody HPA008285

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

33.2
overview Male, age 54 Sample 1
TPM: 33.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 25.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 21.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 46.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 39.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 30.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 38.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 33.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 47.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 32.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 27.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

39.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 43.6
Samples: 149

Max RPKM: 89.6
Min RPKM: 20.1
Std RPKM: 10.6
Median RPKM: 42.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 89.6
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 80.0
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 79.9
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 71.4
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 68.1
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 67.6
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 63.9
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 62.6
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 62.0
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 61.9
Show all
Colon - Transverse
RPKM: 35.9
Samples: 196

Max RPKM: 69.0
Min RPKM: 14.7
Std RPKM: 7.5
Median RPKM: 35.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 69.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 66.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 57.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 52.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 52.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 51.5
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 49.8
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 49.7
GTEX-S341-1426-SM-4AD6U 40-49 years, female 48.8
GTEX-117YX-0826-SM-5H11J 50-59 years, male 48.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

96.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 96.3
FF:10014-101C5 62,83,84 years, mixed 96.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.