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EIF3F

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:63.3TPM
GTEx:25.3RPKM
FANTOM5:172.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA049250

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

63.3
overview Male, age 54 Sample 1
TPM: 57
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 52.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 55.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 54.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 47.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 70.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 86.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 69.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 71.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 70.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 54.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 74
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 58.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

25.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 28.3
Samples: 149

Max RPKM: 48.5
Min RPKM: 16.9
Std RPKM: 5.2
Median RPKM: 28.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 48.5
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 39.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 39.3
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 38.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 38.3
GTEX-145LS-2926-SM-5O99G 60-69 years, female 37.8
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 37.7
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 37.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 37.3
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 36.7
Show all
Colon - Transverse
RPKM: 23.0
Samples: 196

Max RPKM: 47.0
Min RPKM: 13.0
Std RPKM: 5.0
Median RPKM: 22.1
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 47.0
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 35.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 33.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 33.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 33.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 32.9
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 32.7
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 32.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 32.3
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 32.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

172.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 172.1
FF:10014-101C5 62,83,84 years, mixed 172.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.