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CTDNEP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:83.7TPM
GTEx:60.3RPKM
FANTOM5:170.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA037439

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

83.7
overview Male, age 54 Sample 1
TPM: 58.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 59.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 67.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 75.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 61.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 106.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 128.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 86.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 89.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 92.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 96.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 85.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 81.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

60.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 59.4
Samples: 149

Max RPKM: 84.6
Min RPKM: 37.0
Std RPKM: 9.9
Median RPKM: 59.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 84.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 84.4
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 83.6
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 79.9
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 79.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 78.1
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 77.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 76.9
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 76.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 75.3
Show all
Colon - Transverse
RPKM: 61.0
Samples: 196

Max RPKM: 91.7
Min RPKM: 26.2
Std RPKM: 9.1
Median RPKM: 59.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 91.7
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 89.0
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 84.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 83.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 81.7
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 79.8
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 79.0
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 77.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 76.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 76.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

170.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 170.9
FF:10014-101C5 62,83,84 years, mixed 170.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.