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Gene name

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HOXD8
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PATHOLOGY ATLAS

GENE/PROTEIN

Dictionary

GENERAL INFORMATION

Gene name

HOXD8

Gene description

Homeobox D8

Protein class

Predicted intracellular proteins
Transcription factors

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (hTCEpi, RPTEC TERT1)
HPA (normal tissue):Tissue enhanced (epididymis, kidney)

Protein evidence

Evidence at transcript level

ANTIBODY IHC RELIABILITY

Reliability score

Pending cancer tissue analysis.

PROGNOSTIC SUMMARY

Prognostic marker in lung cancer (unfavourable).
Lung cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Pending cancer tissue analysis


STAINING SUMMARY

 

GENE INFORMATION

Gene name

HOXD8 (HGNC Symbol)

Synonyms

HOX4, HOX4E

Description

Homeobox D8 (HGNC Symbol)

Entrez gene summary

This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, located on different chromosomes, consisting of 9 to 11 genes arranged in tandem. This gene is one of several homeobox HOXD genes located in a cluster on chromosome 2. Deletions that remove the entire HOXD gene cluster or the 5' end of this cluster have been associated with severe limb and genital abnormalities. In addition to effects during embryogenesis, this particular gene may also play a role in adult urogenital tract function. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Dec 2010]

Chromosome

2

Cytoband

q31.1

Chromosome location (bp)

176129694 - 176132695

Protein evidence

Evidence at transcript level (all genes)

Ensembl

ENSG00000175879 (version 83.38)

Entrez gene

3234

UniProt

P13378 (UniProt - Evidence at transcript level)

neXtProt

NX_P13378

Antibodypedia

HOXD8 antibodies

PROTEIN BROWSER

HOXD8-001
HOXD8-002
HOXD8-003
HOXD8-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

HOXD8-001
ENSP00000315949
ENST00000313173
P13378 [Direct mapping]
Homeobox protein Hox-D8
Show all
Predicted intracellular proteins
Transcription factors
   Helix-turn-helix domains
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0000977 [RNA polymerase II regulatory region sequence-specific DNA binding]
GO:0001228 [transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0008595 [anterior/posterior axis specification, embryo]
GO:0009952 [anterior/posterior pattern specification]
GO:0043565 [sequence-specific DNA binding]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0048705 [skeletal system morphogenesis]
Show all
290 aa
31.9 kDa
No 0
HOXD8-002
ENSP00000406045
ENST00000429017
A0A0A0MSX5 [Direct mapping]
Homeobox protein Hox-D8
Show all
Predicted intracellular proteins
Show all
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0007275 [multicellular organismal development]
GO:0043565 [sequence-specific DNA binding]
Show all
106 aa
12.9 kDa
No 0
HOXD8-003
ENSP00000409026
ENST00000450510
P13378 [Direct mapping]
Homeobox protein Hox-D8
Show all
Predicted intracellular proteins
Transcription factors
   Helix-turn-helix domains
Show all
GO:0000977 [RNA polymerase II regulatory region sequence-specific DNA binding]
GO:0001228 [transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0008595 [anterior/posterior axis specification, embryo]
GO:0043565 [sequence-specific DNA binding]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
Show all
289 aa
31.8 kDa
No 0
HOXD8-004
ENSP00000437431
ENST00000544999
A0A0A0MTF4 [Direct mapping]
Homeobox protein Hox-D8
Show all
Predicted intracellular proteins
Show all
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0007275 [multicellular organismal development]
GO:0043565 [sequence-specific DNA binding]
Show all
186 aa
21.6 kDa
No 0

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