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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:204.1TPM
GTEx:74.0RPKM
FANTOM5:174.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Chondrocytes:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA043640

  

Antibody HPA046280

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Not detected  

Chondrocytes

 Medium  

Peripheral nerve

 High  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA043640

  

Antibody HPA046280

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Not detected   Low  

Fibroblasts

 Not detected   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

204.1
N/A Female, age 80 Sample 1
TPM: 203.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 158.1
N/A Female, age 57 Sample 3
TPM: 156.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 211.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 290.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

74.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 67.3
Samples: 350

Max RPKM: 222.8
Min RPKM: 19.0
Std RPKM: 35.0
Median RPKM: 58.3
GTEX-13QBU-2526-SM-5LU4X 40-49 years, female 222.8
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 199.3
GTEX-XUJ4-2526-SM-4BOO4 60-69 years, female 186.2
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 185.3
GTEX-YB5E-2126-SM-5IFI7 40-49 years, male 184.0
GTEX-ZPIC-1826-SM-57WFE 40-49 years, female 177.7
GTEX-PWOO-2226-SM-2S1P1 40-49 years, female 172.0
GTEX-WFG8-2326-SM-5S2UE 20-29 years, male 167.5
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 165.2
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 163.9
Show all
Adipose - Visceral (Omentum)
RPKM: 84.2
Samples: 227

Max RPKM: 335.0
Min RPKM: 15.2
Std RPKM: 58.1
Median RPKM: 63.1
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 335.0
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 287.5
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 245.4
GTEX-132QS-0826-SM-5K7WV 60-69 years, male 244.8
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 243.0
GTEX-13RTK-0726-SM-5Q5EN 20-29 years, male 218.6
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 215.3
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 215.1
GTEX-111YS-1326-SM-5EGGK 60-69 years, male 214.8
GTEX-13FH7-1926-SM-5J2OL 50-59 years, female 213.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

174.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 174.5
FF:10010-101C1 65,65,76 years, mixed 174.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.