Fields »
ABOUT
HELP
BLOG
RMDN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.4TPM
GTEx:8.8RPKM
FANTOM5:54.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Low
 

Antibody staining

Antibody HPA026495

  

Endothelial cells

 High  

Glandular cells

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

28.4
overview Male, age 54 Sample 1
TPM: 27.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 38.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 28.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 30.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 36.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 25.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 25.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 33
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 27.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.6
Samples: 149

Max RPKM: 15.7
Min RPKM: 4.2
Std RPKM: 2.0
Median RPKM: 9.6
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 15.7
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 14.4
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 14.4
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 14.2
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 13.8
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 13.4
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 13.3
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 13.2
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 13.1
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 12.9
Show all
Colon - Transverse
RPKM: 8.2
Samples: 196

Max RPKM: 12.8
Min RPKM: 1.8
Std RPKM: 1.6
Median RPKM: 8.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 12.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 12.0
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 11.9
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 11.7
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 11.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 11.2
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 11.2
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 11.2
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 11.0
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 10.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.1
FF:10014-101C5 62,83,84 years, mixed 54.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.