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ZNF354B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.1TPM
GTEx:4.4RPKM
FANTOM5:12.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA029056

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

4.1
overview Male, age 54 Sample 1
TPM: 4.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 10.1
Min RPKM: 1.9
Std RPKM: 1.5
Median RPKM: 5.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 10.1
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 8.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.7
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 8.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 8.5
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 8.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 8.2
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 7.9
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 7.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 7.6
Show all
Colon - Transverse
RPKM: 3.8
Samples: 196

Max RPKM: 10.3
Min RPKM: 0.9
Std RPKM: 1.4
Median RPKM: 3.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 10.3
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 9.0
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 7.6
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 7.2
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 7.0
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 6.8
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 6.6
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 6.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 6.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 6.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.4
FF:10014-101C5 62,83,84 years, mixed 12.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.