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SUZ12

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.0TPM
GTEx:9.2RPKM
FANTOM5:6.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA057436

  

Endothelial cells

 Not detected  

Glandular cells

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

15.0
overview Male, age 54 Sample 1
TPM: 15.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 19.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.9
Samples: 149

Max RPKM: 15.1
Min RPKM: 5.7
Std RPKM: 1.8
Median RPKM: 9.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 15.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 15.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 14.2
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 14.2
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 13.8
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 13.6
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 13.4
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 13.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 12.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 12.9
Show all
Colon - Transverse
RPKM: 8.7
Samples: 196

Max RPKM: 13.9
Min RPKM: 5.4
Std RPKM: 1.6
Median RPKM: 8.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 13.9
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 13.5
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 13.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 13.1
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 12.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 12.5
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 12.5
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 12.4
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 12.1
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 12.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

6.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 6.1
FF:10014-101C5 62,83,84 years, mixed 6.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.