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ESOPHAGUS - Expression summary

RNA expression
HPA:56.0TPM
GTEx:31.8RPKM
FANTOM5:80.4Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

56.0
overview Female, age 70 Sample 1
TPM: 58.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 45.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 64.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

31.8

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 31.8
Samples: 286

Max RPKM: 114.9
Min RPKM: 3.9
Std RPKM: 17.4
Median RPKM: 29.3
GTEX-1212Z-2126-SM-5FQTM 60-69 years, male 114.9
GTEX-XOTO-2126-SM-4B64U 50-59 years, male 100.7
GTEX-11DXY-1426-SM-5N9CN 60-69 years, male 99.1
GTEX-13OW8-2326-SM-5L3I9 60-69 years, male 98.8
GTEX-T5JC-1726-SM-4DM6U 20-29 years, male 98.7
GTEX-11ZTS-2626-SM-5EGIC 60-69 years, female 91.5
GTEX-13FLV-1126-SM-5J2NO 50-59 years, male 86.1
GTEX-YECK-1626-SM-5IFHQ 60-69 years, male 84.9
GTEX-12KS4-0926-SM-5BC5S 30-39 years, male 84.6
GTEX-WVLH-1426-SM-4MVNX 50-59 years, male 77.7
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

80.4

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 80.4
FF:10015-101C6 68,74,75 years, mixed 80.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.