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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:365.3TPM
GTEx:183.9RPKM
FANTOM5:937.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not available
 

Antibody staining

Antibody HPA002242

  

Antibody CAB001513

  

Antibody CAB019952

  

Adipocytes

 Not detected   Low   Low  

Fibroblasts

 Not detected   Medium   Medium  

Peripheral nerve

 Not detected   Low  

Chondrocytes

 Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA002242

  

Antibody CAB001513

  

Antibody CAB019952

  

Adipocytes

 Not detected   Not detected   Low  

Fibroblasts

 Not detected   Medium   Low  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

365.3
N/A Female, age 80 Sample 1
TPM: 321.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 186.3
N/A Female, age 57 Sample 3
TPM: 199.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 811.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 308.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

183.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 160.4
Samples: 350

Max RPKM: 597.4
Min RPKM: 62.0
Std RPKM: 62.1
Median RPKM: 146.5
GTEX-XYKS-2726-SM-4E3IC 60-69 years, female 597.4
GTEX-Q734-1826-SM-2I3EL 40-49 years, female 504.5
GTEX-POYW-0726-SM-2XCEO 60-69 years, male 497.0
GTEX-OOBK-0226-SM-2YUMF 40-49 years, male 400.8
GTEX-POMQ-2326-SM-5S2VS 20-29 years, female 352.8
GTEX-NPJ8-0226-SM-48TBN 40-49 years, male 328.7
GTEX-13JVG-0226-SM-5J1MW 60-69 years, male 326.9
GTEX-XMD2-0226-SM-4WWEE 60-69 years, female 321.8
GTEX-11O72-0226-SM-59869 40-49 years, male 321.2
GTEX-R55F-1426-SM-2TF53 50-59 years, male 318.2
Show all
Adipose - Visceral (Omentum)
RPKM: 220.2
Samples: 227

Max RPKM: 1093.5
Min RPKM: 85.6
Std RPKM: 113.7
Median RPKM: 194.3
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 1093.5
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 687.1
GTEX-ZAJG-1626-SM-5HL7I 50-59 years, female 675.2
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 661.9
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 643.4
GTEX-ZZPU-0326-SM-5N9BJ 50-59 years, female 563.0
GTEX-131XE-2026-SM-5LZW1 50-59 years, male 551.2
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 546.2
GTEX-XV7Q-1726-SM-4BRUU 40-49 years, female 462.8
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 461.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

937.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 937.5
FF:10010-101C1 65,65,76 years, mixed 937.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.