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PTPN11

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.6TPM
GTEx:20.3RPKM
FANTOM5:25.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB005377

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

31.6
overview Male, age 54 Sample 1
TPM: 31.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 35.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 35.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 28.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 30.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 37.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 32.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 36
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 29.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 31.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 34.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

20.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 24.0
Samples: 149

Max RPKM: 45.0
Min RPKM: 13.4
Std RPKM: 5.8
Median RPKM: 22.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 45.0
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 44.4
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 39.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 38.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 38.6
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 37.2
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 37.2
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 35.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 33.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 33.0
Show all
Colon - Transverse
RPKM: 17.5
Samples: 196

Max RPKM: 47.7
Min RPKM: 7.3
Std RPKM: 7.2
Median RPKM: 15.5
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 47.7
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 39.0
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 38.6
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 38.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 37.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 36.6
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 36.6
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 33.6
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 30.4
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 30.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

25.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 25.0
FF:10014-101C5 62,83,84 years, mixed 25.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.