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CDC42EP4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.4TPM
GTEx:22.4RPKM
FANTOM5:85.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA023335

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

24.4
overview Male, age 54 Sample 1
TPM: 25.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 21.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 32.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 40.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 27.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 23.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 28.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

22.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 27.1
Samples: 149

Max RPKM: 50.9
Min RPKM: 7.9
Std RPKM: 6.7
Median RPKM: 26.6
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 50.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 43.3
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 41.1
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 40.4
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 40.2
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 40.1
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 39.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 38.5
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 38.0
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 37.6
Show all
Colon - Transverse
RPKM: 18.9
Samples: 196

Max RPKM: 48.3
Min RPKM: 8.2
Std RPKM: 7.2
Median RPKM: 16.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 48.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 47.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 44.7
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 40.0
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 39.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 37.9
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 34.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 33.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 33.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 32.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

85.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 85.5
FF:10014-101C5 62,83,84 years, mixed 85.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.