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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GAS1
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GAS1

Gene description

Growth arrest-specific 1

Protein class

Cancer-related genes
Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Cell line enhanced (AN3-CA, BJ hTERT+, RH-30)
HPA (normal tissue):Tissue enhanced (endometrium)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Abundant cytoplasmic expression in glandular cells with a few cases of membranous expression in male and female reproductive tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA066902 , CAB024164
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PROGNOSTIC SUMMARY

Prognostic marker in thyroid cancer (unfavourable), renal cancer (unfavourable), colorectal cancer (unfavourable) and stomach cancer (unfavourable).
Thyroid cancer p<0.001
Renal cancer p<0.001
Colorectal cancer p<0.001
Stomach cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA066902
CAB024164

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer tissues showed moderate to strong cytoplasmic positivity. Several lymphomas and squamous cell carcinomas were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A majority of breast and thyroid cancers and several cases of colorectal cancers showed moderate cytoplasmic immunoreactivity while the remaining malignant cells were weakly stained or negative.

GENE INFORMATION

Gene name

GAS1

Synonyms

Description

Growth arrest-specific 1 (HGNC Symbol)

Entrez gene summary

Growth arrest-specific 1 plays a role in growth suppression. GAS1 blocks entry to S phase and prevents cycling of normal and transformed cells. Gas1 is a putative tumor suppressor gene. [provided by RefSeq, Jul 2008]

Chromosome

9

Cytoband

q21.33

Chromosome location (bp)

86944363 - 86947189

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000180447 (version 83.38)

Entrez gene

2619

UniProt

P54826 (UniProt - Evidence at transcript level)

neXtProt

NX_P54826

Antibodypedia

GAS1 antibodies

PROTEIN BROWSER

GAS1-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GAS1-001
ENSP00000298743
ENST00000298743
P54826 [Direct mapping]
Growth arrest-specific protein 1
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   MEMSAT3 predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0007050 [cell cycle arrest]
GO:0008589 [regulation of smoothened signaling pathway]
GO:0010955 [negative regulation of protein processing]
GO:0016021 [integral component of membrane]
GO:0035924 [cellular response to vascular endothelial growth factor stimulus]
GO:0042981 [regulation of apoptotic process]
GO:0045165 [cell fate commitment]
GO:0045930 [negative regulation of mitotic cell cycle]
GO:0046658 [anchored component of plasma membrane]
GO:0048589 [developmental growth]
GO:0060628 [regulation of ER to Golgi vesicle-mediated transport]
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345 aa
35.7 kDa
Yes 0

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