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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GAS1
  • TISSUE

  • CELL

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

GAS1

Gene description

Growth arrest-specific 1

Protein class

Cancer-related genes
Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enhanced (endometrium)
GTEx:Expressed in all
FANTOM5:Tissue enhanced (endometrium)

Protein evidence

Evidence at protein level

Protein expression

Abundant cytoplasmic expression in glandular cells with a few cases of membranous expression in male and female reproductive tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Approved based on 2 antibodies.
HPA066902 , CAB024164
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
N/A
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Urinary bladder

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (endometrium)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (endometrium)

GENE INFORMATION

Gene name

GAS1

Synonyms

Description

Growth arrest-specific 1 (HGNC Symbol)

Entrez gene summary

Growth arrest-specific 1 plays a role in growth suppression. GAS1 blocks entry to S phase and prevents cycling of normal and transformed cells. Gas1 is a putative tumor suppressor gene. [provided by RefSeq, Jul 2008]

Chromosome

9

Cytoband

q21.33

Chromosome location (bp)

86944363 - 86947189

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000180447 (version 83.38)

Entrez gene

2619

UniProt

P54826 (UniProt - Evidence at transcript level)

neXtProt

NX_P54826

Antibodypedia

GAS1 antibodies

PROTEIN BROWSER

GAS1-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GAS1-001
ENSP00000298743
ENST00000298743
P54826 [Direct mapping]
Growth arrest-specific protein 1
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   MEMSAT3 predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0007050 [cell cycle arrest]
GO:0008589 [regulation of smoothened signaling pathway]
GO:0010955 [negative regulation of protein processing]
GO:0016021 [integral component of membrane]
GO:0035924 [cellular response to vascular endothelial growth factor stimulus]
GO:0042981 [regulation of apoptotic process]
GO:0045165 [cell fate commitment]
GO:0045930 [negative regulation of mitotic cell cycle]
GO:0046658 [anchored component of plasma membrane]
GO:0048589 [developmental growth]
GO:0060628 [regulation of ER to Golgi vesicle-mediated transport]
Show all
345 aa
35.7 kDa
Yes 0

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