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LSM10

SMALL INTESTINE - Expression summary

RNA expression
HPA:20.3TPM
GTEx:13.6RPKM
FANTOM5:27.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

20.3
overview Male, age 65 Sample 1
TPM: 16.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 21.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 23.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 20.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 13.6
Samples: 88

Max RPKM: 31.0
Min RPKM: 4.0
Std RPKM: 4.9
Median RPKM: 12.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 31.0
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 24.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 23.5
GTEX-1192X-2526-SM-59868 50-59 years, male 23.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 23.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 22.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 21.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 21.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 20.3
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 20.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

27.5

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 27.5
FF:10024-101D6 15,40,85 years, mixed 27.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.