Tissue expression of LDOC1 - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	18.5	TPM
GTEx:	23.6	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Keratinocytes:	Medium
Langerhans:	Not detected
Melanocytes:	Not detected

Antibody staining	Antibody HPA051768
Fibroblasts	Medium
Keratinocytes	Medium
Langerhans	Not detected
Melanocytes	Not detected

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA051768
Epidermal cells	Medium

SKIN - HPA RNA-seq

Average TPM	18.5

Female, age 34

Sample 1
TPM: 13.6

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 10.7

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 31.2

SKIN - GTEx RNA-seq

Average RPKM	23.6

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 22.7

Samples: 250

Max RPKM: 45.9
Min RPKM: 0.1
Std RPKM: 5.7
Median RPKM: 22.6

GTEX-YECK-0326-SM-4W1YS

60-69 years, male

45.9

GTEX-WFG7-2026-SM-5SI7P

20-29 years, male

43.2

GTEX-Y114-2126-SM-4TT8B

50-59 years, female

39.3

GTEX-11WQC-1826-SM-5GU59

60-69 years, male

38.1

GTEX-11P7K-1126-SM-5HL4L

30-39 years, male

37.6

GTEX-145MG-1526-SM-5Q5EM

50-59 years, male

37.1

GTEX-13G51-1826-SM-5KLZH

60-69 years, male

35.3

GTEX-12ZZY-0726-SM-5EQ66

60-69 years, male

34.6

GTEX-ZTX8-1326-SM-4YCEL

20-29 years, male

34.5

GTEX-ZC5H-1526-SM-5HL9Y

40-49 years, female

33.9

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Skin - Sun Exposed (Lower leg)
RPKM: 24.3

Samples: 357

Max RPKM: 47.7
Min RPKM: 0.1
Std RPKM: 6.2
Median RPKM: 23.5

GTEX-S7SE-0126-SM-2XCD5

50-59 years, male

47.7

GTEX-Y3IK-2426-SM-4WWDU

50-59 years, female

47.1

GTEX-ZZPT-0226-SM-5E43X

50-59 years, male

44.4

GTEX-Y5V6-2426-SM-4VDSB

60-69 years, male

42.5

GTEX-ZVTK-0426-SM-51MRS

20-29 years, male

41.4

GTEX-YJ89-0126-SM-4TT3X

60-69 years, male

40.7

GTEX-ZDTS-0126-SM-4WAY5

60-69 years, male

40.1

GTEX-ZQUD-1426-SM-57WER

30-39 years, male

39.7

GTEX-ZE9C-2726-SM-57WB5

60-69 years, male

39.2

GTEX-13FXS-0226-SM-5IJCK

50-59 years, male

38.9

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue