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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

0.00.10.20.30.40.50.60.70.80.91.0Survival probability 0 1 2 3 4YearsLow (n=66)High (n=36)
0.00.10.20.30.40.50.60.70.80.91.0Survival probability 0 1 2 3 4YearsLow (n=51)High (n=51)

Expression cutoff

52.5 FPKM 40.0 FPKM

3-year survival high

0% 0%

3-year survival low

51% 46%

Log-rank P value

3.34e-2 3.24e-1

Interactive survival scatter plot (individual patient data)




Stage:



01234Living years0.0102030405060708090100110120130FPKMAlive (n=73)Dead (n=29)BestMedian

TCGA RNA samples

Average FPKM

48.7

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 136.5
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 117.8
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 117.2
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 111.6
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 103.8
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 100.1
TCGA-GN-A263-01A 24 years, male, white, stage:iv 100.0
TCGA-EB-A431-01A 34 years, male, white, stage:iic 91.7
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 88.3
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 88.0
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 87.6
TCGA-GF-A769-01A 39 years, male, white, stage:iic 87.2
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 85.5
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 84.1
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 83.5
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 83.3
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 82.2
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 75.8
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 74.4
TCGA-FR-A726-01A 90 years, male, white, stage:iic 73.0
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 72.3
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 70.8
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 70.0
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 67.5
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 67.3
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 65.3
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 64.9
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 61.3
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 61.0
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 59.8
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 58.3
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 57.6
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 56.2
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 53.2
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 53.0
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 52.9
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 52.2
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 51.8
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 51.1
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 50.8
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 50.2
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 49.2
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 47.1
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 46.8
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 45.8
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 44.6
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 44.2
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 44.0
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 43.5
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 41.7
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 40.0
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 39.9
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 39.6
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 38.8
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 38.7
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 38.1
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 38.0
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 37.0
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 36.4
TCGA-ER-A196-01A 64 years, female, white, stage:iic 35.8
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 35.6
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 34.8
TCGA-ER-A194-01A 77 years, male, white 34.8
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 34.1
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 33.9
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 33.4
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 33.0
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 33.0
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 32.0
TCGA-YG-AA3N-01A 67 years, male, stage:iic 32.0
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 31.7
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 31.7
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 31.6
TCGA-HR-A5NC-01A 90 years, female 31.3
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 31.1
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 30.5
TCGA-EB-A550-01A 75 years, female, white, stage:iic 28.9
TCGA-EB-A24C-01A 56 years, male, white 28.5
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 28.2
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 28.2
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 28.0
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 28.0
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 27.1
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 24.9
TCGA-EB-A299-01A 63 years, male, white, stage:iia 24.5
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 20.2
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 19.8
TCGA-DA-A960-01A 73 years, male, white, stage:iib 19.1
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 18.4
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 18.4
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 18.2
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 18.2
TCGA-ER-A42H-01A 77 years, male, white 18.0
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 17.8
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 17.2
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 17.2
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 16.3
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 16.1
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 14.7
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 13.5
TCGA-EB-A553-01A 62 years, male, white, stage:iic 13.0
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 12.4
Show all
29.340.065.212.4117.80102030405060708090100110120130
29.340.065.212.4117.80102030405060708090100110120130

MELANOMA - Protein expression

 

Antibody HPA041270

Antibody CAB015460

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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