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GJC1

COLON - Expression summary

RNA expression
HPA:4.0TPM
GTEx:7.6RPKM
FANTOM5:15.3Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

4.0
overview Male, age 54 Sample 1
TPM: 3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 10
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.9
Samples: 149

Max RPKM: 24.5
Min RPKM: 3.3
Std RPKM: 3.7
Median RPKM: 10.4
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 24.5
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 21.7
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 20.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 20.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 19.2
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 17.5
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 17.0
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 16.4
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 16.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 16.2
Show all
Colon - Transverse
RPKM: 5.1
Samples: 196

Max RPKM: 19.1
Min RPKM: 0.1
Std RPKM: 5.1
Median RPKM: 3.4
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 19.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 18.0
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 17.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 17.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 17.0
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 16.9
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 16.5
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 16.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 15.7
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 15.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.3
FF:10014-101C5 62,83,84 years, mixed 15.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.