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PCP4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.8TPM
GTEx:27.6RPKM
FANTOM5:44.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA005792

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

11.8
overview Male, age 54 Sample 1
TPM: 15
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 80.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

27.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 51.7
Samples: 149

Max RPKM: 193.2
Min RPKM: 2.0
Std RPKM: 39.0
Median RPKM: 42.1
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 193.2
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 179.4
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 176.2
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 161.7
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 148.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 147.2
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 142.6
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 136.9
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 135.5
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 119.9
Show all
Colon - Transverse
RPKM: 9.2
Samples: 196

Max RPKM: 70.6
Min RPKM: 0.0
Std RPKM: 12.8
Median RPKM: 4.1
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 70.6
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 67.4
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 66.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 55.8
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 44.7
GTEX-117YX-0826-SM-5H11J 50-59 years, male 43.0
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 41.5
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 41.5
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 38.5
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 35.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

44.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 44.4
FF:10014-101C5 62,83,84 years, mixed 44.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.