Fields »
ABOUT
HELP
BLOG
SMTN

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:44.9TPM
GTEx:34.3RPKM
FANTOM5:78.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA051778

  

Antibody HPA058590

  

Antibody CAB001721

  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Adipocytes

 Not detected  

Chondrocytes

 Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA051778

  

Antibody HPA058590

  

Antibody CAB001721

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

44.9
N/A Female, age 80 Sample 1
TPM: 75.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 31.8
N/A Female, age 57 Sample 3
TPM: 34.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 51.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 30.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

34.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 35.7
Samples: 350

Max RPKM: 175.4
Min RPKM: 7.2
Std RPKM: 22.9
Median RPKM: 29.8
GTEX-13OW6-0526-SM-5L3HY 50-59 years, male 175.4
GTEX-139D8-0326-SM-5IJCJ 30-39 years, female 146.3
GTEX-UTHO-0426-SM-5SI7N 60-69 years, male 143.9
GTEX-13111-1726-SM-5EGJZ 50-59 years, male 133.7
GTEX-139YR-2426-SM-5J1OB 50-59 years, male 132.5
GTEX-YECK-0226-SM-4W215 60-69 years, male 127.9
GTEX-WI4N-1126-SM-3LK7Q 40-49 years, female 118.2
GTEX-OOBJ-0226-SM-2YUMM 60-69 years, male 117.1
GTEX-13QJ3-0426-SM-5RQHP 50-59 years, male 106.1
GTEX-11ZUS-0726-SM-59886 30-39 years, male 100.4
Show all
Adipose - Visceral (Omentum)
RPKM: 32.1
Samples: 227

Max RPKM: 108.0
Min RPKM: 8.3
Std RPKM: 14.2
Median RPKM: 28.8
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 108.0
GTEX-X585-2526-SM-4QAS1 50-59 years, male 78.9
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 71.8
GTEX-11ZUS-1826-SM-5FQTR 30-39 years, male 68.8
GTEX-11DXZ-1426-SM-5H12A 50-59 years, male 67.6
GTEX-WWTW-1326-SM-4MVNT 50-59 years, male 65.8
GTEX-X8HC-2326-SM-4QAS4 50-59 years, female 64.4
GTEX-WOFM-0726-SM-3MJF8 20-29 years, male 64.3
GTEX-11DXX-2026-SM-5EGJL 60-69 years, female 64.2
GTEX-ZC5H-1626-SM-5HL7L 40-49 years, female 63.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

78.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 78.8
FF:10010-101C1 65,65,76 years, mixed 78.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.