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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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TACSTD2
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    TISSUE

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    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

TACSTD2

Gene description

Tumor-associated calcium signal transducer 2

Protein class

Disease related genes
Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (A-431, CAPAN-2, HaCaT)
HPA (normal tissue):Tissue enhanced (esophagus)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Abundant cytoplasmic and membrane expression in respiratory and squamous epithelial cells.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 3 antibodies.
HPA043104 , HPA055067 , CAB072852
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Urothelial cancer

STAINING SUMMARY

HPA043104
HPA055067
CAB072852

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Many squamous cell carcinomas, a few urothelial cancers as well as a few basal cell carcinomas displayed moderate cytoplasmic and membranous immunoreactivity. Remaining cancer tissues were generally negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Moderate to strong membranous and/or cytoplasmic positivity was observed in most squamous cell carcinomas, prostate, urothelial, thyroid, ovarian, endometrial cancers along with few carcinoids and breast cancers. Remaining cancer tissues were mostly negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Papillary adenocarcinoma of thyroid, cervical and urothelial cancers along with several breast, prostate, ovarian, endometrial, lung, skin and pancreatic cancers showed moderate to strong membranous immunoreactivity with additional cytoplasmic staining in few cases. Remaining cancer tissues were negative.

GENE INFORMATION

Gene name

TACSTD2 (HGNC Symbol)

Synonyms

EGP-1, GA733-1, M1S1, TROP2

Description

Tumor-associated calcium signal transducer 2 (HGNC Symbol)

Entrez gene summary

This intronless gene encodes a carcinoma-associated antigen. This antigen is a cell surface receptor that transduces calcium signals. Mutations of this gene have been associated with gelatinous drop-like corneal dystrophy.[provided by RefSeq, Dec 2009]

Chromosome

1

Cytoband

p32.1

Chromosome location (bp)

58575423 - 58577773

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000184292 (version 83.38)

Entrez gene

4070

UniProt

P09758 (UniProt - Evidence at protein level)

neXtProt

NX_P09758

Antibodypedia

TACSTD2 antibodies

PROTEIN BROWSER

TACSTD2-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TACSTD2-001
ENSP00000360269
ENST00000371225
P09758 [Direct mapping]
Tumor-associated calcium signal transducer 2
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Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0004872 [receptor activity]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005887 [integral component of plasma membrane]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007601 [visual perception]
GO:0008283 [cell proliferation]
GO:0009925 [basal plasma membrane]
GO:0010633 [negative regulation of epithelial cell migration]
GO:0016020 [membrane]
GO:0016328 [lateral plasma membrane]
GO:0050678 [regulation of epithelial cell proliferation]
GO:0051497 [negative regulation of stress fiber assembly]
GO:0060675 [ureteric bud morphogenesis]
GO:0070062 [extracellular exosome]
GO:0090191 [negative regulation of branching involved in ureteric bud morphogenesis]
GO:1900025 [negative regulation of substrate adhesion-dependent cell spreading]
GO:1900028 [negative regulation of ruffle assembly]
GO:2000146 [negative regulation of cell motility]
GO:2000738 [positive regulation of stem cell differentiation]
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323 aa
35.7 kDa
Yes 1

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