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Gene name

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In atlas

Reliability

Reliability

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Validation

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Validation

Method

Validation

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Expression

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Detectable

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Antibodies

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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:27.2TPM
GTEx:58.3RPKM
FANTOM5:40.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA031355

 

Adipocytes

Not detected  

Glandular cells

Low  

Myoepithelial cells

Low  
 
 

BREAST - HPA RNA-seq

Average TPM

27.2

overview Female, age 52 Sample 1
TPM: 26.5
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 40.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 27
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 14.6
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

58.3

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 58.3
Samples: 214

Max RPKM: 145.0
Min RPKM: 15.8
Std RPKM: 25.2
Median RPKM: 52.4
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 145.0
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 138.3
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 134.9
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 121.5
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 117.6
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 111.4
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 111.3
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 111.0
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 110.8
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 108.3
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 108.2
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 103.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 102.4
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 101.8
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 101.4
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 100.6
GTEX-144GM-0926-SM-5O994 20-29 years, male 99.1
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 98.6
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 98.1
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 98.0
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 95.5
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 95.0
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 94.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 93.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 93.0
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 92.9
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 92.0
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 91.8
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 91.7
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 90.9
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 90.0
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 89.0
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 88.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 86.2
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 84.2
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 84.1
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 83.2
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 83.1
GTEX-11P82-1326-SM-5HL62 20-29 years, male 82.5
GTEX-117XS-1926-SM-5GICO 60-69 years, male 82.0
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 81.2
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 80.7
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 80.4
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 80.0
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 79.5
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 79.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 79.1
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 78.3
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 77.1
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 77.0
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 76.3
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 76.0
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 73.9
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 73.9
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 73.6
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 72.8
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 72.7
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 71.6
GTEX-117YX-1426-SM-5H12H 50-59 years, male 71.4
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 70.3
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 70.0
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 69.9
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 69.9
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 69.7
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 69.7
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 69.3
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 69.2
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 68.5
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 68.3
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 66.9
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 65.0
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 64.4
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 64.3
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 62.6
GTEX-REY6-2426-SM-48FF5 60-69 years, male 62.6
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 61.6
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 61.1
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 60.7
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 60.0
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 59.9
GTEX-WFON-1826-SM-3GILG 40-49 years, male 59.4
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 59.3
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 59.2
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 59.2
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 59.0
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 58.7
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 58.7
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 58.6
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 58.6
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 57.4
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 57.2
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 57.2
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 56.7
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 56.5
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 56.1
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 55.7
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 55.0
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 54.6
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 54.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 54.0
GTEX-QVJO-1826-SM-447C9 60-69 years, female 53.5
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 53.4
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 53.3
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 53.3
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 53.0
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 53.0
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 52.6
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 52.3
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 52.1
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 52.0
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 51.5
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 51.1
GTEX-13113-1726-SM-5GCOO 60-69 years, female 51.0
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 50.9
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 50.2
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 50.1
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 50.0
GTEX-1122O-1226-SM-5H113 60-69 years, female 49.5
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 49.5
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 49.3
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 49.0
GTEX-QEL4-2126-SM-447AE 50-59 years, male 48.5
GTEX-11OF3-1926-SM-59889 60-69 years, male 48.4
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 48.1
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 47.8
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 47.3
GTEX-S341-1526-SM-4AD6K 40-49 years, female 47.1
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 46.4
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 46.2
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 46.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 45.8
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 45.6
GTEX-11P81-1926-SM-5BC53 30-39 years, female 45.5
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 45.5
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 44.2
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 43.9
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 43.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 43.8
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 43.7
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 43.6
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 43.5
GTEX-T6MN-0726-SM-32PML 50-59 years, male 43.4
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 42.0
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 41.6
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 41.6
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 41.4
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 41.3
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 41.3
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 41.2
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 41.2
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 41.1
GTEX-TML8-1226-SM-32QON 40-49 years, female 40.3
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 39.8
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 39.6
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 39.2
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 39.2
GTEX-XBED-1626-SM-47JYN 60-69 years, male 39.0
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 38.9
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 38.9
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 38.8
GTEX-X261-0626-SM-3NMD9 50-59 years, male 38.7
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 38.5
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 38.5
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 38.5
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 38.1
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 37.4
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 36.8
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 36.7
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 36.2
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 35.9
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 35.9
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 35.7
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 35.7
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 35.7
GTEX-111YS-1926-SM-5GICC 60-69 years, male 35.5
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 35.4
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 35.3
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 35.2
GTEX-1192X-2326-SM-5987X 50-59 years, male 35.1
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 34.9
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 34.6
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 34.3
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 34.2
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 34.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 33.8
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 33.7
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 33.6
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 33.4
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 33.3
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 33.1
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 32.8
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 32.8
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 32.6
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 32.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 31.6
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 31.6
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 31.1
GTEX-RU72-0626-SM-46MUI 50-59 years, female 30.6
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 30.3
GTEX-14753-2426-SM-5LU8U 60-69 years, male 29.9
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 27.8
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 26.9
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 26.8
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 26.7
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 26.4
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 25.7
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 25.2
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 25.2
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 24.5
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 23.7
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 23.7
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 22.6
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 19.9
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 15.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

40.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 40.4
FF:10080-102A8 77 years, female 40.4

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