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BTBD6

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.8TPM
GTEx:41.3RPKM
FANTOM5:16.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA031355

  

Endothelial cells

 Low  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

28.8
overview Male, age 54 Sample 1
TPM: 34.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 25.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 26.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 30
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 26.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 30.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 33.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 34.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 29.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

41.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 39.2
Samples: 149

Max RPKM: 67.6
Min RPKM: 15.1
Std RPKM: 10.0
Median RPKM: 38.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 67.6
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 67.3
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 63.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 63.6
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 61.5
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 60.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 60.5
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 60.2
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 59.9
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 56.7
Show all
Colon - Transverse
RPKM: 42.9
Samples: 196

Max RPKM: 64.8
Min RPKM: 8.4
Std RPKM: 8.2
Median RPKM: 43.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 64.8
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 62.0
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 62.0
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 60.0
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 58.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 57.8
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 55.7
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 54.9
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 54.7
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 54.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

16.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 16.2
FF:10014-101C5 62,83,84 years, mixed 16.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.