Fields »
ABOUT
HELP
BLOG
P4HB

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:273.1TPM
GTEx:133.5RPKM
FANTOM5:381.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA018884

  

Antibody CAB012463

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

273.1
overview Male, age 54 Sample 1
TPM: 437.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 522
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 594.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 332.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 587.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 119.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 82.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 118.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 129.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 158.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 175.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 129.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 163.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

133.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 98.8
Samples: 149

Max RPKM: 224.5
Min RPKM: 72.0
Std RPKM: 19.4
Median RPKM: 93.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 224.5
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 149.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 144.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 142.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 139.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 136.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 135.7
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 131.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 129.4
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 126.9
Show all
Colon - Transverse
RPKM: 159.9
Samples: 196

Max RPKM: 350.1
Min RPKM: 64.9
Std RPKM: 58.6
Median RPKM: 152.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 350.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 340.8
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 335.6
GTEX-144GN-1126-SM-5LU33 50-59 years, male 310.6
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 305.8
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 283.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 282.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 281.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 275.4
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 274.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

381.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 381.4
FF:10014-101C5 62,83,84 years, mixed 381.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.