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BCAP31
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

0.00.10.20.30.40.50.60.70.80.91.0Survival probability 0 1 2 3 4YearsLow (n=54)High (n=48)
0.00.10.20.30.40.50.60.70.80.91.0Survival probability 0 1 2 3 4YearsLow (n=51)High (n=51)

Expression cutoff

129.5 FPKM 124.7 FPKM

3-year survival high

56% 53%

3-year survival low

21% 22%

Log-rank P value

1.27e-1 3.45e-1

Interactive survival scatter plot (individual patient data)




Stage:



01234Living years0.050100150200250300350FPKMAlive (n=73)Dead (n=29)BestMedian

TCGA RNA samples

Average FPKM

141.3

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 367.8
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 313.5
TCGA-EB-A431-01A 34 years, male, white, stage:iic 299.0
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 276.5
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 267.0
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 247.8
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 221.0
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 219.4
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 219.0
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 217.3
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 216.2
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 214.3
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 206.2
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 205.6
TCGA-ER-A194-01A 77 years, male, white 204.5
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 202.1
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 194.1
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 186.7
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 185.3
TCGA-GN-A263-01A 24 years, male, white, stage:iv 184.2
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 178.3
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 177.3
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 173.3
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 173.1
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 167.5
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 161.5
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 159.4
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 157.9
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 157.8
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 155.3
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 149.4
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 149.1
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 148.7
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 144.4
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 143.1
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 142.9
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 142.8
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 142.8
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 142.3
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 142.1
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 141.8
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 138.7
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 138.5
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 136.3
TCGA-HR-A5NC-01A 90 years, female 136.1
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 133.0
TCGA-ER-A196-01A 64 years, female, white, stage:iic 132.0
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 131.3
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 127.8
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 126.0
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 124.7
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 124.6
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 124.6
TCGA-EB-A24C-01A 56 years, male, white 124.4
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 123.8
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 122.9
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 122.7
TCGA-EB-A550-01A 75 years, female, white, stage:iic 121.8
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 121.2
TCGA-FR-A726-01A 90 years, male, white, stage:iic 121.1
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 120.4
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 120.2
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 119.6
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 116.7
TCGA-EB-A299-01A 63 years, male, white, stage:iia 116.4
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 116.3
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 115.3
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 115.3
TCGA-DA-A960-01A 73 years, male, white, stage:iib 114.3
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 112.3
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 111.7
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 109.8
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 109.7
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 109.2
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 108.8
TCGA-ER-A42H-01A 77 years, male, white 108.1
TCGA-EB-A553-01A 62 years, male, white, stage:iic 106.0
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 104.9
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 101.4
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 100.7
TCGA-YG-AA3N-01A 67 years, male, stage:iic 99.2
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 99.0
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 98.8
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 97.6
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 97.5
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 96.2
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 94.6
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 93.8
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 90.4
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 88.0
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 87.4
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 87.4
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 86.2
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 73.9
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 73.3
TCGA-GF-A769-01A 39 years, male, white, stage:iic 72.9
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 72.8
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 72.3
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 71.4
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 70.8
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 68.3
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 62.7
Show all
106.5124.7161.062.7221.0050100150200250300350
106.5124.7161.062.7221.0050100150200250300350

MELANOMA - Protein expression

 

Antibody HPA003906

Antibody CAB015350

Antibody CAB015424

 Antibody staining
  High
  Medium
  Low
  Not detected
    
 Intensity
  Strong
  Moderate
  Weak
  Negative
    
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
    
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
    

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