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BCAP31

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:136.0TPM
GTEx:55.8RPKM
FANTOM5:44.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA003906

  

Antibody CAB015350

  

Antibody CAB015424

  

Endothelial cells

 Medium   Medium   Low  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

136.0
overview Male, age 54 Sample 1
TPM: 130
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 140.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 141.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 124.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 132.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 154.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 177.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 119.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 115.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 156.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 141.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 139.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 94.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

55.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 49.3
Samples: 149

Max RPKM: 82.8
Min RPKM: 31.5
Std RPKM: 8.2
Median RPKM: 48.0
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 82.8
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 72.7
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 69.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 69.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 68.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 68.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 66.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 65.9
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 65.2
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 63.9
Show all
Colon - Transverse
RPKM: 60.7
Samples: 196

Max RPKM: 134.2
Min RPKM: 31.0
Std RPKM: 13.9
Median RPKM: 59.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 134.2
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 118.9
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 106.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 88.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 87.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 85.6
GTEX-Q734-1126-SM-48TZY 40-49 years, female 81.8
GTEX-11DXX-1826-SM-5H126 60-69 years, female 81.5
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 81.1
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 81.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

44.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 44.7
FF:10014-101C5 62,83,84 years, mixed 44.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.