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BCAP31
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    CELL

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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:46.5RPKM
FANTOM5:34.3Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA003906

 

Antibody CAB015350

 

Antibody CAB015424

 

Glial cells

Medium   Medium   Not detected  

Neuronal cells

High   Medium   Low  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

46.5

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 46.5
Samples: 94

Max RPKM: 87.6
Min RPKM: 21.0
Std RPKM: 14.2
Median RPKM: 46.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 87.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 85.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 77.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 76.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 73.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 72.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 72.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 70.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 67.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 64.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 61.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 60.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 59.7
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 59.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 59.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 57.5
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 57.3
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 57.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 56.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 56.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 56.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 55.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.5
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 55.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 54.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 54.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 53.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 52.2
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 51.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 51.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 49.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 49.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 49.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 49.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 49.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 48.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 47.8
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 47.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 47.8
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 47.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 47.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 47.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 46.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 46.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 46.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 46.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 45.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 45.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 45.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 44.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 44.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 43.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 43.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 43.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 42.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 42.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 41.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 41.3
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 41.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 40.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 40.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 39.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 39.7
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 38.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 38.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 37.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 37.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 36.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 36.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 35.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 35.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 34.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 34.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 34.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 34.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 33.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 33.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 30.2
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 29.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 28.7
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 28.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 27.7
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 26.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 25.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 24.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 23.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 23.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 22.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 21.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 21.0
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

34.3

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 40.7
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 38.9

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