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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.3TPM
GTEx:0.5RPKM
FANTOM5:7.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA013321

  

Adipocytes

 Low  

Fibroblasts

 High  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA013321

  

Adipocytes

 Low  

Fibroblasts

 High  

Peripheral nerve

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

1.3
N/A Female, age 80 Sample 1
TPM: 1.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 0.6
N/A Female, age 57 Sample 3
TPM: 0.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 2.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 1.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 0.5
Samples: 350

Max RPKM: 1.0
Min RPKM: 0.1
Std RPKM: 0.2
Median RPKM: 0.4
GTEX-13NZA-0126-SM-5K7UH 60-69 years, male 1.0
GTEX-YF7O-2426-SM-5IFJL 50-59 years, male 1.0
GTEX-ZVZO-0226-SM-5A5LA 40-49 years, male 1.0
GTEX-1122O-2026-SM-5NQ91 60-69 years, female 0.9
GTEX-11GSO-2326-SM-5A5LX 60-69 years, male 0.9
GTEX-1211K-2226-SM-5FQU6 60-69 years, female 0.9
GTEX-13O21-1526-SM-5K7W4 50-59 years, male 0.9
GTEX-13S7M-0226-SM-5S2UG 60-69 years, female 0.9
GTEX-QLQW-1226-SM-2S1Q9 30-39 years, male 0.9
GTEX-Y5V5-2426-SM-5IFJA 60-69 years, female 0.9
Show all
Adipose - Visceral (Omentum)
RPKM: 0.5
Samples: 227

Max RPKM: 1.4
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.4
GTEX-XYKS-1826-SM-4E3JV 60-69 years, female 1.4
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 1.1
GTEX-Y5V5-0226-SM-5S2N8 60-69 years, female 1.1
GTEX-12WSL-1126-SM-5CVNK 50-59 years, male 1.0
GTEX-117YX-0726-SM-5GIET 50-59 years, male 0.9
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 0.9
GTEX-11P81-0726-SM-5PNYH 30-39 years, female 0.9
GTEX-131XE-2026-SM-5LZW1 50-59 years, male 0.9
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 0.9
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 0.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

7.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 7.7
FF:10010-101C1 65,65,76 years, mixed 7.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.