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KLHDC8B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.8TPM
GTEx:34.4RPKM
FANTOM5:21.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA008463

  

Antibody HPA014467

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

5.8
overview Male, age 54 Sample 1
TPM: 5.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 11.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

34.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 52.6
Samples: 149

Max RPKM: 103.6
Min RPKM: 18.5
Std RPKM: 19.1
Median RPKM: 51.9
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 103.6
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 101.6
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 91.7
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 90.3
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 89.1
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 88.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 88.5
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 86.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 85.9
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 84.9
Show all
Colon - Transverse
RPKM: 20.5
Samples: 196

Max RPKM: 83.3
Min RPKM: 3.0
Std RPKM: 16.3
Median RPKM: 15.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 83.3
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 63.0
GTEX-11GSP-1626-SM-5986N 60-69 years, female 62.8
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 58.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 57.2
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 56.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 56.0
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 55.3
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 55.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 55.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

21.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 21.1
FF:10014-101C5 62,83,84 years, mixed 21.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.