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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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SEPT10
  • TISSUE

  • premium

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

SEPT10

Gene description

Septin 10

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

10
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in most tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Caution, Splice and/or transcript discrepancy exists. Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA056304
SHOW MORE

PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA056304

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues displayed moderate cytoplasmic positivity. Additional membranous staining was observed in colorectal, pancreatic, skin, testicular and urothelial cancers. A few cases of colorectal, head & neck, testicular, pancreatic and liver cancers were strongly stained. Lymphomas were negative.

GENE INFORMATION

Gene name

SEPT10 (HGNC Symbol)

Synonyms

FLJ11619

Description

Septin 10 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the septin family of cytoskeletal proteins with GTPase activity. This protein localizes to the cytoplasm and nucleus and displays GTP-binding and GTPase activity. A pseudogene for this gene is located on chromosome 8. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2012]

Chromosome

2

Cytoband

q13

Chromosome location (bp)

109542982 - 109614206

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000186522 (version 83.38)

Entrez gene

151011

UniProt

Q9P0V9 (UniProt - Evidence at protein level)

neXtProt

NX_Q9P0V9

Antibodypedia

SEPT10 antibodies

PROTEIN BROWSER

SEPT10-001
SEPT10-002
SEPT10-003
SEPT10-004
SEPT10-006
SEPT10-007
SEPT10-008
SEPT10-010
SEPT10-012
SEPT10-013

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SEPT10-001
ENSP00000380824
ENST00000397712
Q9P0V9 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0007049 [cell cycle]
GO:0051301 [cell division]
Show all
454 aa
52.6 kDa
No 0
SEPT10-002
ENSP00000349116
ENST00000356688
B5ME97 [Direct mapping]
Septin 10, isoform CRA_c; Septin-10
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
Show all
544 aa
62.9 kDa
No 0
SEPT10-003
ENSP00000407790
ENST00000437928
E7EX04 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
473 aa
54.6 kDa
No 0
SEPT10-004
ENSP00000396728
ENST00000415095
E7EW69 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
450 aa
52.1 kDa
No 0
SEPT10-006
ENSP00000380826
ENST00000397714
Q9P0V9 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005525 [GTP binding]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0007049 [cell cycle]
GO:0051301 [cell division]
Show all
431 aa
50.1 kDa
No 0
SEPT10-007
ENSP00000408392
ENST00000442746
C9JNR7 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
61 aa
6.9 kDa
No 0
SEPT10-008
ENSP00000396051
ENST00000411469
C9JEW2 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
58 aa
6.4 kDa
No 0
SEPT10-010
ENSP00000416597
ENST00000423520
C9JEQ7 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
97 aa
10.5 kDa
No 0
SEPT10-012
ENSP00000445707
ENST00000493445
F5H1F2 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
98 aa
10.9 kDa
No 0
SEPT10-013
ENSP00000441218
ENST00000461295
F5GYV2 [Direct mapping]
Septin-10
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
Show all
26 aa
2.9 kDa
No 0

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