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SIRT7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.5TPM
GTEx:16.8RPKM
FANTOM5:14.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA053669

  

Antibody CAB037261

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium   Not detected  

Peripheral nerve/ganglion

 Medium   Low  
   
   
   

COLON - HPA RNA-seq

Average TPM

11.5
overview Male, age 54 Sample 1
TPM: 14.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 5.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 10.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 11
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.1
Samples: 149

Max RPKM: 22.0
Min RPKM: 3.8
Std RPKM: 2.7
Median RPKM: 8.7
GTEX-V955-1726-SM-4JBHF 60-69 years, male 22.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 20.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 17.5
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 17.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 15.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 14.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 13.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 13.7
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 13.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 13.2
Show all
Colon - Transverse
RPKM: 22.7
Samples: 196

Max RPKM: 61.1
Min RPKM: 4.7
Std RPKM: 11.2
Median RPKM: 23.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 61.1
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 51.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 47.6
GTEX-Q734-1126-SM-48TZY 40-49 years, female 46.9
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 45.9
GTEX-R55D-1826-SM-48FEF 50-59 years, male 42.2
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 40.7
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 39.6
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 39.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 38.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

14.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 14.9
FF:10014-101C5 62,83,84 years, mixed 14.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.