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TCEA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.7TPM
GTEx:13.2RPKM
FANTOM5:41.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA043786

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

47.7
overview Male, age 54 Sample 1
TPM: 48
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 45.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 38.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 41.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 31.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 47.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 53.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 44.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 52.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 65
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 56.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 58.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 36.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 15.5
Samples: 149

Max RPKM: 24.2
Min RPKM: 9.9
Std RPKM: 2.5
Median RPKM: 15.3
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 24.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 22.6
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 21.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 21.9
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 21.6
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 20.9
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 20.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 20.7
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 20.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 19.7
Show all
Colon - Transverse
RPKM: 11.5
Samples: 196

Max RPKM: 21.6
Min RPKM: 6.0
Std RPKM: 3.2
Median RPKM: 10.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 21.6
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 20.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 19.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 18.9
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 18.8
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 18.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 18.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 18.5
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 18.3
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 18.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

41.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 41.8
FF:10014-101C5 62,83,84 years, mixed 41.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.