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AGAP4

COLON - Expression summary

RNA expression
HPA:7.8TPM
GTEx:1.3RPKM

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA042490

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

7.8
overview Male, age 54 Sample 1
TPM: 4.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 4.8
Min RPKM: 0.1
Std RPKM: 0.7
Median RPKM: 1.2
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 4.8
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 4.0
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 3.3
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 3.0
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 3.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 3.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 2.9
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 2.8
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 2.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 2.7
Show all
Colon - Transverse
RPKM: 1.2
Samples: 196

Max RPKM: 2.9
Min RPKM: 0.1
Std RPKM: 0.6
Median RPKM: 1.2
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 2.9
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 2.9
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 2.5
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 2.5
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 2.4
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 2.4
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 2.4
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 2.3
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 2.2
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 2.2
Show all

COLON - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.