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H1F0

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:140.1TPM
GTEx:110.1RPKM
FANTOM5:177.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
 

Antibody staining

Antibody HPA000843

  

Endothelial cells

 High  

Glandular cells

 High  
 
 

COLON - HPA RNA-seq

Average TPM

140.1
overview Male, age 54 Sample 1
TPM: 142.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 148.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 138.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 238.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 80.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 111.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 178.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 134.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 111
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 125
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 163.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 138.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 111.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

110.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 99.6
Samples: 149

Max RPKM: 601.7
Min RPKM: 31.5
Std RPKM: 71.7
Median RPKM: 78.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 601.7
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 397.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 304.5
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 282.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 271.5
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 243.1
GTEX-13111-1926-SM-5GCOL 50-59 years, male 223.3
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 213.8
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 196.5
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 195.2
Show all
Colon - Transverse
RPKM: 118.1
Samples: 196

Max RPKM: 1027.4
Min RPKM: 34.9
Std RPKM: 81.1
Median RPKM: 102.6
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 1027.4
GTEX-Y114-1526-SM-4TT79 50-59 years, female 386.5
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 277.1
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 259.3
GTEX-ZP4G-1726-SM-4WWCM 20-29 years, female 223.5
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 221.5
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 214.1
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 206.6
GTEX-ZGAY-2126-SM-4YCFB 40-49 years, female 205.6
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 205.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

177.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 177.1
FF:10014-101C5 62,83,84 years, mixed 177.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.