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ARID2

COLON - Expression summary

RNA expression
HPA:5.9TPM
GTEx:3.5RPKM
FANTOM5:22.9Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

5.9
overview Male, age 54 Sample 1
TPM: 7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.6
Samples: 149

Max RPKM: 9.1
Min RPKM: 1.7
Std RPKM: 0.7
Median RPKM: 3.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 9.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 5.5
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 5.0
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 5.0
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 5.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 5.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 4.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 4.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 4.8
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 4.8
Show all
Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 5.1
Min RPKM: 1.4
Std RPKM: 0.6
Median RPKM: 3.3
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 5.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 5.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 4.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 4.8
GTEX-Y114-1526-SM-4TT79 50-59 years, female 4.8
GTEX-S341-1426-SM-4AD6U 40-49 years, female 4.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 4.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 4.6
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 4.5
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 4.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.9
FF:10014-101C5 62,83,84 years, mixed 22.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.